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Center for Research in Scientific Computation

Book Chapters

Kevin Flores:

  • A Dolezal, KB Flores, K Traynor, GV Amdam (2013) The evolution and development of eusocial insect behavior. In “Advances in Evolutionary Developmental Biology”. Jeffrey Streelman. Wiley-Blackwell, pp. 37-57. https://doi.org/10.1002/9781118707449.ch3

Adriana San Miguel:

  • Clark, A.*, Huayta, J.*, Suresh Arulalan, K.*, San Miguel, A., “Microfluidics devices for imaging and manipulation of C. elegans” Peer-reviewed book chapter in: Micro and Nano Systems for Biophysical Studies of Cells and Small Organisms. Academic Press, 2021, 295-321. Online Link
  • Porto, D.A., Rouse, T.M., San-Miguel, A., Lu, H.. “Microfluidic platforms for genetic and genomic studies in model organisms.” Microfluidic Methods for Molecular Biology. 2016, 1-18. Online Link

Ralph Smith:

  • H.T. Banks and R.C. Smith, “Models for Control in Smart Material Structures,” in Identifica- tion and Control in Systems Governed by Partial Differential Equations, SIAM, Philadelphia 1993, pp. 26-44.
  • 2. H.T. Banks and R.C. Smith, “Active Control of Acoustic Pressure Fields Using Smart Material Technologies,” in Flow Control, Institute for Mathematics and Its Applications (IMA) Volume 68, Springer-Verlag, 1995, pp. 1-33.
  • 3. H.T. Banks and R.C. Smith, “Numerical Techniques for Simulation, Parameter Estimation and Noise Control in Structural Acoustic Systems,” in Dynamics and Control of Distributed Systems, Editors: H.S. Tzou and L.A. Bergman, Cambridge University Press, 1998, pp. 202- 263.
  • 4. A.R. Paterson, B.J. Reich, R.C. Smith, A.G. Wilson, and J.L. Jones, “Bayesian Approaches to Uncertainty Quantification and Structure Refinement from X-ray Diffraction,” chapter in Materials Discovery and Design: Data Science and Optimal Learning, T. Lookman, S. Eidenbenz, F. Alexander and C. Barnes, Eds., Springer Series in Materials Science, Vol. 280, pp. 81-102, 2018.
  • 5. S. P. Singh, A. R. Paterson, L. J. Wendelberger, C. M. Fancher, B. J. Reich, R. C. Smith, A. G. Wilson, and J. L. Jones, “Algorithms in Diffraction Profile Analysis,” chapter in Volume 1: Big Data Methods in Experimental Materials Discovery, World Scientific Publishers, Ed. S.R. Kalidindi, S.V. Kalinin and T. Lookman, https://doi.org/10.1142/11389m May 2020.

Hien Tran:

  • Linear Quadratic Optimal Control Problem for Linear Systems with Unbounded Input and Output Operators: Numerical Approximations”, International Series of Numerical Mathematics, Birkh ̈auser Verlag Basel, Vol. 91 (1989), pp. 171–195, (with K. Ito).
  • “Numerical Studies of the Linear Quadratic Control Problem for Retarded Systems with Delay in Control”, Progress in Systems and Control Theory, Birkh ̈auser, Boston, 1991, pp. 307–324.
  • “Modeling of Flow Dynamics and its Impact on the Optimal Reactor Design Problem”, Identification and Control in Systems Governed by Partial Differential Equations, SIAM Publications, 1993, pp. 1–13 (with J. S. Scroggs and K. J. Bachmann).
  • “Mathematical Issues in Optimal Design of a Vapor Transport Reactor”, IMA Volumes in Mathematics and its Applications, Vol. 68, Flow Control (Max D. Gunzburger, ed.), (1994), pp. 197–218 (with K. Ito and J. S. Scroggs).
  • “Optimal Control of Thermally Coupled Navier-Stokes Equation”, Optimal Design and Control (Max D. Gunzburger et al., editors), Birkh ̈auser, (1995), pp. 199–214 (with K. Ito and J.S. Scroggs).
  • “Modeling and Control of Advanced Chemical Vapor Deposition Processes”, Mathe- matics of Microstucture Evolution (ed. by L.Q. Chen, et al), SIAM/TMS (1996), pp. 327-344 (with H.T. Banks, K. Ito, J.S. Scroggs, N. Dietz and K. Bachmann).
  • “Reduced Order Based Compensator Control of Thin Film Growth in a CVD Reactor”, Proc. Int. Conf. on Optimal Control of Complex Dynamic Structures (Oberwolfach, June 4-10, 2000), Int. Series Num. Math., Birkh ̈auser, (2001), Vol. 139, pp. 1-17 (with H.T. Banks).
  • “Optimal Control Theory” in Encyclopedia of Theoretical Ecology, A. Hastings and L. Gross, editors, University of California Press, pp. 519-523, 2012.
  • “Application of the Unscented Kalman Filtering to Parameter Estimation”, in Math- ematical Modeling and Validation in Physiology (ed. by J. Batzel, M. Bachar and F. Kappel), Springer-Verlag Berlin Heidelberg, (2013), pp. 75-88 (with A. Attarian, J. Batzel, and B. Matzuka).
  • “Baseball Pitch Classification: A Bayesian Method and Dimension Reduction Investiga- tion”, IAENG Transactions on Engineering Sciences, Special Issue of the Int. Multicon- ference of Engineers and Computer Scientists 2013 and World Congress on Engineering 2013 (ed. by Sio-Iong Ao, Alan Hoi-Shou Chan, Hideki Katagiri and Li Xu), (2014), pp. 393-399 (with A. Attarian, G. Danis, J. Gronsbell, G. Iervolina, L. Layne, and D. Padgett).
  • “A Dynamic Feature Selection Based LDA Approach to Baseball Pitch Prediction”, Lecture Notes in Artificial Intelligence, 9441, Trends and Applications in Knowledge
  • Discovery and Data Mining (ed. Xiao-Li Li, Tru Cao, Ee-Peng Lim, Zhi-Hua Zhou, Tu- Bao Ho, David Cheung, Hiroshi Motoda), PAKDD 2015 Workshops: BigPMA, VLSP, QIMIE, DAEBH, May 19-21, 2015, Ho Chi Minh City, Viet Nam, pp. 125-137, (with P. Hoang, M. Hamilton, J. Murray, and C. Stafford).
  • “Real-Time Stabilization of a Single Inverted Pendulum Using a Power Series Based Controller”, Transactions on Engineering Technologies, Int. MultiConference of En- gineers and Computer Scientists, Springer, (ed. by Gi-Chul Yang, Oscar Castillo, Xu Huang, Sio-Iong Ao), ISBN 978-981-10-0550-3, 2016, pp. 1-14 (with Emese A. Kennedy).
  • “War-Gaming Applications for Achieving Optimum Acquisition of Future Space Sys- tems”, book chapter in ”Simulation and Gaming” (ed. by Dragan Cvetkovic), ISBN 978-953-51-3800-6, doi:10.5772/intechopen.69391, 2018 (with Tien M. Nguyen, Andy T. Guillen, Tung X. Bui and Sumner S. Matsunaga).
  • “Hepatitis C Viral Dynamics Using a Combination Therapy of Interferon, Ribavirin, and Telaprevir: Mathematical Modeling and Model Validation”, book chapter in ”Hep- atitis C – From Infection to Cure” (ed. by Imran Shahid), INTECH, April 2018, DOI: 10.5772/intechopen.72268 (with P. Aston, A. Cassenote, C. J. Mendes-Correa, K. Cran- field, H. O’Farrell, P. Hoang, G. Lankford and A. Segurado).
  • “A Moving Horizon State Estimator for Real-Time Stabilization of a Double Inverted Pendulum”, in: D. Marc Kilgour, et al. (eds) Recent Developments in Mathemati- cal, Statistical and Computational Sciences, Springer Proceedings in Mathematics and Statistics, Vol. 343, p. 3 – 14, The V AMMCS International Conference, Waterloo, Canada, August 18-23, 2019, (with A. Bernstein and E. King).
  • “Benchmarking Virtual Reinforcement Learning Algorithms to Balance a Real Inverted Pendulum”. In: Arai, K. (eds) Intelligent Systems and Applications. IntelliSys 2021. Lecture Notes in Networks and Systems, vol 296. Springer, Cham. (with Dylan Bates), https://doi.org/10.1007/978-3-030-82199-9-17.
  • “Ensemble UNet++ for Locating the Exponential Growth Virus Samples”. In: Arai, K. (eds) Intelligent Systems and Applications. IntelliSys 2021. Lecture Notes in Networks and Systems, vol 296. Springer, Cham. https://doi.org/10.1007/978-3-030-82199-9-31 (with Yahe Yu and Ruian Ke).
  • “Airplane Detection and Classification Based on Mask R-CNN and YOLO with Feature Engineering”. In: Arai, K. (eds) Intelligent Systems and Applications. IntelliSys 2022.
  • Lecture Notes in Networks and Systems, vol 543. Springer, Cham. (with Adam Attar- ian, Minxuan Luo, Yangyang Luo, Xingfei Xu, Chunxiao Yi, Yahe Yu, and Fa Zhang), https://doi.org/10.1007/978-3-031-16078-3-52.